#Metabarcoding — Search

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Physalia-courses@ONLINE @Physacourses · Mar 16

.@fonamental kicking off the 10th ed. of the #Metabarcoding in #MicrobialEcology workshop with @AnnaSandionigi @LuigiBorruso & a great cohort of participants! They are gonna learn bioinformatic processing of NGS data & key multivariate stats through lectures & hands-on exercises

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Benagen-ONT @benagen3571 · Mar 10

[novel tool] MitoNGS: an online platform to analyze fish metabarcoding data in high-resolution. #nanopore #metabarcoding doi.org/10.1093/molbev…

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Diversity MDPI @DiversityMDPI · Mar 5

📢 Special Issue Alert 🔎 🧬Special Issue: "DNA #Metabarcoding for Marine Invertebrate Surveillance" ✒️Edited by Dr. Ana S. Lavrador and Dr. Sofia Duarte 📆Deadline: 31 October 2026 🔗Learn more and subbrnw.ch/21x0tFk3cR05 #SpecialIssue #Diversity #MarineInvertebzTHrQ

Physalia-courses@ONLINE @Physacourses · Feb 27

🦠 Interested in #MicrobialEcology? Want to use #Metabarcoding to identify & characterize bacterial communities & their abundance in your samples? Join us to learn hands-on how to analyse metabarcoding data using #QIIME2 & R!@AnnaSandionigi@delCampoLabphysalia-courses.org/courses-worksh…r

Metabarcoding in microbial Ecology

From physalia-courses.org

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South African Network for Coastal&Oceanic Research @SANCORcommunity · Feb 16

🧬 Interested in environmental DNA? Join the Introductory eDNA Workshop on 🗓️6–7 July 2026 a@t @RhodesUni, Makhanda🇿🇦 Learn #eDNA sampling, #metabarcoding and #bioinformatics — perfect for researchers & students. Free to attend (travel/stay excsancor.nrf.ac.za/Documents/July…qBHl5

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Hydrobiologia @HYDR_Springer · Feb 7

New in Hydrobiologia: Evaluation of nanopore-based #diatom #metabarcoding in tropical freshwater ecosystems doi.org/10.1007/s10750… rdcu.be/e2LZO

Evaluation of nanopore-based diatom metabarcoding in tropical freshwater ecosystems

Hydrobiologia - DNA metabarcoding for diatoms has emerged as a promising alternative, offering rapid and comprehensive biodiversity assessments, especially as bioindicators of water quality....

From link.springer.com

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Nigel Raine @NigelERaine · Feb 5

New #metabarcoding results show the distribution of cavity nesting #bees & #wasps, & their food sources, from schools across🇨🇦. This community science work, led by Sage Handler, reveals network links among plants, #pollinators, parasites, predators & predoi.org/10.3897/mbmg.1…265

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Iliana Bista @ilianaBista · Feb 5

We set out to review long-read sequencing for #biodiversity analysis 🧬 Happy to share the paper just published@MethodsEcolEvol Monitoring applications for #eDNA #metabarcoding #metagenomics with side-by-side comparisons of both #ONT & #PacBio read moredoi.org/10.1111/2041-2…n3

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Iliana Bista @ilianaBista · Feb 5

Hot off the press! Long-read sequencing for #biodiversity analysis #eDNA #metabarcoding #DNAbarcoding

Methods in Ecology and Evolution @MethodsEcolEvol · Feb 5

📖 Published! This review provides an overview of studies to date using long-read sequencing platforms for biodiversity analyses of eukaryotes, from eDNA and community metabarcoding, shotgun sequencing, and DNA barcoding🧪 🧬 🌍 Read mobuff.ly/iuVV8tcktoY

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Daniele De Luca @DeLuca_Daniele · Feb 3

📢Just published in Journal of Microbiological Methods: FastqOrienter 🛠️Automated orientation & quality diagnostics of paired-end #metabarcoding reads. 📄50 days free acceskwnsfk27.r.eu-west-1.awstrack.me/L0/https:%2F%2…6PR 💻Cogithub.com/ddl88/FastqOri…stEc #Bioinformatics #microbiology #python

Dr Ashrenee Govender-Paul @AshreneeG · Jan 16

Replying to @AshreneeG

#MarineBiodiversity #Metabarcoding #Zooplankton #OceanMonitoring #GlobalScience #SouthAfrica #SCOR #MetaZooGene

CEAB-CSIC @ceabcsic · Jan 9

🧬Un estudi de quasi 10 anys detecta la pèrdua del ~40% de la #biodiversitat al #mar dels parcs nacionals de l’Arxipèlag de Cabrera i de les Illes Atlàntiques. La recerca, liderada per@xturon09 , aplica el #metabarcoding com a eina de #biomonitorització�ceab.csic.es/un-estudi-de-l…WgJ

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JMSE MDPI @JMSE_MDPI · Dec 29, 2025

��#WidelyViewed An ongoing influence of “Advancements in DNA Metabarcoding Protocols for Monitoring Zooplankton in Marine and Brackish Environments” in recent research 👀Check out the full article herebrnw.ch/21wYHydVd #DNA #metabarcoding #zooplankton #marine #brackisCx

Jojy John @JojyJon · Dec 9, 2025

Amplicon Week — Day 2 Today’s post walks through the full amplicon analysis workflow: Works for 16S, ITS, 18S, 12S & COI. 📘 Blog:jojyjohn28.github.io/blog/amplicon-…j 📂 GitHubgithub.com/jojyjohn28/Amp…Ka #QIIME2 #Metabarcoding #MicrobialEcology

GitHub - jojyjohn28/AmpliconWeek_2025: Amplicon sequencing & metabarcoding week: 16S, ITS, 18S,...

Amplicon sequencing & metabarcoding week: 16S, ITS, 18S, 12S, COI workflows - jojyjohn28/AmpliconWeek_2025

From github.com

Ali Hakimzadeh @Bioinfo94 · Dec 5, 2025

🧬 Long-read metabarcoding is powerful, but chimera filters can trash good reads. Our new study benchmarks three algorithms on full-length ITS and shows how false positives distort results. �peerj.com/articles/20456/R9 #Metabarcoding #LongRead #Bioinformatics #Chimeras

Diversity & Distributions @consbiog · Dec 2, 2025

🧬 This new study aims to advancing #MarineConservation using #metabarcoding and metaphylogeography for a multi-year biomonitoring of #benthic communities of national parks across two seas 🌊 doi.org/10.1111/ddi.70…fYKI

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Rumakanta Sapkota @Rumakanta1 · Nov 12, 2025

Working with or planning to study soil fauna? 🪱🕷️🧬 Our paper shows how combining eDNA and organism-based metabarcoding reveals hidden soil diversity beyond traditional methods. 🌍 #SoilBiodiversity #eDNA #Metabarcodsciencedirect.com/science/articl…n8Wm

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